PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Bobra.0266s0005.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
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Family | ERF | ||||||||
Protein Properties | Length: 171aa MW: 19048.8 Da PI: 10.6727 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 44.4 | 4.2e-14 | 70 | 124 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpseng...krkrfslgkfgtaeeAakaaiaarkklege 56 ++++GVr+++ g + AeIrd k+ ++++g+f e+Aaka+++ +++++ge Bobra.0266s0005.1.p 70 TDFRGVRQRP-AGNFSAEIRDS---RlevKNNKIWIGTFEKVEDAAKAYDKKALEINGE 124 579*******.8*********4...3555569***********************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 171 aa Download sequence |
MKGIFTALMI FVIILPTPPV YEAGPSANNW LNVMDVTDSS VTPDVPEKRK RQRKSPKKAN 60 AKQTKFSPTT DFRGVRQRPA GNFSAEIRDS RLEVKNNKIW IGTFEKVEDA AKAYDKKALE 120 INGEHAILNF LPDGTRNPNS KSANRVFGTD SKYYNKANIH VVVGGLRGKW * |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 48 | 53 | KRKRQR |
2 | 48 | 58 | KRKRQRKSPKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43410.1 | 4e-17 | ERF family protein |