PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Bobra.0229s0027.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
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Family | Nin-like | ||||||||
Protein Properties | Length: 262aa MW: 29399.1 Da PI: 9.5742 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 88.3 | 6.6e-28 | 134 | 184 | 2 | 52 |
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 +k++s+++ls+yF++pi +A+ke+++c+TvLK+iCR++G++RWPhRk++s+ Bobra.0229s0027.1.p 134 KKRLSFKELSQYFHMPIDAASKEMNICPTVLKKICRHHGLPRWPHRKLRSI 184 689*********************************************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 262 aa Download sequence |
MGSIWASLPD VRPGSCFAQQ KACNASLISP FPFLGTLSGA QLRGGLVLKK AQGKGFLVEV 60 LVHNSYSCNG NMFKLSFSFT KESYSLLHTA MASFLHHVGQ TTSLGNFPIQ HGRGHSFFGN 120 NVRGNEDDEQ THLKKRLSFK ELSQYFHMPI DAASKEMNIC PTVLKKICRH HGLPRWPHRK 180 LRSIDRLSNR LKVYLGESKA QECPVTLLCH NVEGWYFFSI GCFIAVVVML MYVRRLNEKL 240 GDFIYIPFAK GVHVEDGLYC P* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66990.1 | 2e-16 | Nin-like family protein |