PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bobra.0164s0046.1.p
Organism
Botryococcus braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
Family NF-YC
Protein Properties Length: 302aa    MW: 30409.4 Da    PI: 4.5408
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bobra.0164s0046.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC36.51e-1110852398
                NF-YC 23 larikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivpr 98
                          +rik +++ade+v +i   +Pv++ +a el++  +   +   a e   +tl ++ i+a v    + dfl div +
  Bobra.0164s0046.1.p 10 ASRIKSLMRADEEVGKIGQASPVVIGRATELLVGSIMEGAAKLATERGSKTLTQAHIKAHVLGEPTLDFLKDIVAT 85
                         58*********************************99999999******************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MAPKRQNTLA SRIKSLMRAD EEVGKIGQAS PVVIGRATEL LVGSIMEGAA KLATERGSKT  60
LTQAHIKAHV LGEPTLDFLK DIVATAPDLP PEGEGAPKEK RKRAEGVSRR PSGKGARAME  120
SGAGPASPRA PKQRKLAKGE AQPMEASGED TSSEDDEDTK SRDGASGNPQ PPASNLAEAA  180
AWSAGAGPVP PREGDPDSGC LPSRLAQGFP PNEHPDEGGK GAGTAGPTGD AGSGEDEGGT  240
ADIGNDRNDE DEKDDSGTGG ALGGTASGPV PPIALPSVPS LGAPALLAAK PSLVSQEDDY  300
D*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19490.11e-17NF-YC family protein