PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bobra.0022s0260.1.p
Organism
Botryococcus braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
Family NF-YA
Protein Properties Length: 345aa    MW: 35620.6 Da    PI: 7.6631
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bobra.0022s0260.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA94.71e-29166222158
            CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                          +ep+YVN KQy  Il+RRq+Rak+e+e+kl +k+rkpylh+SRh+hA rR Rg+gGrF
  Bobra.0022s0260.1.p 166 EEPVYVNHKQYACILRRRQSRAKAEAENKL-IKTRKPYLHKSRHEHASRRLRGPGGRF 222
                          69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    
MEAPMSPCSS TSGKSYGAGS HGRRLKPRAE TTGRVAGDGR TEESPSVVEG QPLDTAELTH  60
EHSAVITQPS TTGAEMAVPS TSNHPGLSGS QYGFSQPIFH GYDPYYPTPP PLVFAHGVIP  120
QVSGAQSQVP FLFPTGGLPP GTVAGTPTLP PGMGHRVPLP SDFAEEEPVY VNHKQYACIL  180
RRRQSRAKAE AENKLIKTRK PYLHKSRHEH ASRRLRGPGG RFLNSTGSVP AGQHQGLPTA  240
AESVVISGAD GSLTEASPDS VEPSSSNPYN CGEPSSSCPT GGDSLRPQCG LRGAGGGQEG  300
MSMSVAAGGL LRTGQTQPDG QGQVLNPPQA LPSALSPSGV VAVQ*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54160.11e-28NF-YA family protein