PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA67255.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family ERF
Protein Properties Length: 305aa    MW: 33733.5 Da    PI: 5.7967
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA67255.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.63.2e-1890141156
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                 + y+GVr++  +g+WvAeIr+p   + r  r +lg+f ta eAa  +++a+++++g+
  PKA67255.1  90 CSYRGVRQRT-WGKWVAEIREP---N-RgNRLWLGTFPTALEAANSYDEAARAMYGH 141
                 67*****999.**********8...2.359************************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MIISAAAVGC AREPYILAIL KAACTLCNRS RRPRRKREGP DSVAETLAKW REINKQFVSN  60
DGGNQIRKAP AKGSRKGCMR GKGGPENSGC SYRGVRQRTW GKWVAEIREP NRGNRLWLGT  120
FPTALEAANS YDEAARAMYG HSARLNFAGN EPAATSSSSC GSTTTAHYSS LSDEAAEVKS  180
RKNELSFADT SRDEKKCDLG IVDLPDEMFD VEDMLRMMDD DPGNTGWDAD NGLQCDSPWR  240
TGSPSAFSFQ LQNPDAKMLG TLGHMEQQGS DYCYDFTRSE KPALDFEMNA DQDLFDHGFY  300
NANLF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13138RRPRRKRE
23236RPRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40350.12e-45ERF family protein