PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA67084.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family C2H2
Protein Properties Length: 183aa    MW: 20123.4 Da    PI: 6.3924
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA67084.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2140.0001588110123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ykC +Cg  F++   +  H+++H
  PKA67084.1  88 YKCDICGHEFPNAQAYGGHMSSH 110
                 9*******************999 PP
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    
MSQCNSPGEH SDLHQTDHMK PAPPPPSDSP AAADEPIIVR SSFQGFITMA ISANNLSTIG  60
DLVNHDWEAV RYFLRRQVRP GGDVCRVYKC DICGHEFPNA QAYGGHMSSH SKRKKNSGRD  120
DNSSAAALSR KTTRTASVLP AAGEKRMRMA VGREEEPMGK KRVDGDDDDD EWIEFLNPDA  180
AMP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46090.12e-07C2H2 family protein