PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA66318.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family MYB_related
Protein Properties Length: 322aa    MW: 34605.7 Da    PI: 8.7269
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA66318.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding37.55.3e-1293137347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+ E++ ++ + k+lG+g+W+ I+r    +Rt+ q+ s+ qky
       PKA66318.1  93 PWTEHEHKMFLLGLKKLGKGDWRGISRNYVITRTPTQVASHAQKY 137
                      8*****************************89************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MARRCSHCNN DGHNSRTCPN LGVRLFGVRL TDGSIRKSAS TGNLAGYARS PAAGGSPDPS  60
AAAAACGYAS DVCHGGSGSG SGSGSRERKR GVPWTEHEHK MFLLGLKKLG KGDWRGISRN  120
YVITRTPTQV ASHAQKYFIR HSCLNRRKKR ASLFDIVTDE SPFDEHFPSP TISQEREAQT  180
SSSLSLLKPS GEQAVTKKDH STTEMEAAEP PPPAVIHYTY PPPVYPGFFF PVFPYPVPCW  240
PAYAARTADS ESHEIIKPTA IHLKSSIHVD DNFGISELSL FGCHGAGEQA AVAPKFAQMP  300
ERPSAFHASG ANDSSSSAVQ AL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.12e-56MYB_related family protein