PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA66235.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

bZIP

Protein Properties

Length: 421aa MW: 44963.7 Da PI: 7.2551

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA66235.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	72.9	4.7e-23	310	372	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkr+rrkq+NRe+ArrsR+RK+ae+eeL+ +v++L++eN L+ e++++kke+++l s++ PKA66235.1 310 ERELKRQRRKQSNRESARRSRLRKQAECEELAHRVEVLKEENANLRAEVNKIKKEYEQLLSQN 372 89**********************************************************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 421 aa Download sequence
MGNGEADPPA KAPKVSGAQE QPSVTSSTPA TPVYPDWSTF QAYSPIPPPG FFHSAVASSP 60 PPHPYVWGAQ HLIPPYGTPP PYVVYPHGGI YAHPSMPPGS HPFSPYAVAS PNRNVETSIS 120 LVPSQGTVPG IGEPEGKSSE GKEKSPIKRS KGSLGSLNMI TGKNSELGKT SGASGNGVFS 180 QSGDSGSEAS SEGSDANSQN DSPQKGYDTQ NSSEAVAHQN GNPAHVNLHG SQNGTNRAQS 240 QPMIGQTMSI IPMPVPAPPI AVTGPTTNLN IGMDYWSANS SLSSVRGKVP ATAVAPMVPG 300 GPSELWMQDE RELKRQRRKQ SNRESARRSR LRKQAECEEL AHRVEVLKEE NANLRAEVNK 360 IKKEYEQLLS QNTSLKERIG EIPRGTNELI HEIHEKHSVE DGNHQNVDSV AKGREPDLGQ 420 K

Sequence ? help Back to Top

Protein Sequence Length: 421 aa Download sequence

MGNGEADPPA KAPKVSGAQE QPSVTSSTPA TPVYPDWSTF QAYSPIPPPG FFHSAVASSP  60
PPHPYVWGAQ HLIPPYGTPP PYVVYPHGGI YAHPSMPPGS HPFSPYAVAS PNRNVETSIS  120
LVPSQGTVPG IGEPEGKSSE GKEKSPIKRS KGSLGSLNMI TGKNSELGKT SGASGNGVFS  180
QSGDSGSEAS SEGSDANSQN DSPQKGYDTQ NSSEAVAHQN GNPAHVNLHG SQNGTNRAQS  240
QPMIGQTMSI IPMPVPAPPI AVTGPTTNLN IGMDYWSANS SLSSVRGKVP ATAVAPMVPG  300
GPSELWMQDE RELKRQRRKQ SNRESARRSR LRKQAECEEL AHRVEVLKEE NANLRAEVNK  360
IKKEYEQLLS QNTSLKERIG EIPRGTNELI HEIHEKHSVE DGNHQNVDSV AKGREPDLGQ  420
K

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	327	333	RRSRLRK
2	327	334	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35530.1	8e-84	bZIP family protein