PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA65971.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

GRF

Protein Properties

Length: 423aa MW: 45320.6 Da PI: 8.2941

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA65971.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	78.7	5.6e-25	76	120	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCsr++++++k+CErH++rgr+rsrk++e PKA65971.1 76 DPEPGRCRRTDGKKWRCSRDAVPDQKYCERHINRGRHRSRKPVEG 120 79****************************************986 PP
2	QLQ	38.1	4.6e-14	11	45	2	36
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 +FT Q ++L++Q l+y y+ an+P+P++Ll ++ PKA65971.1 11 PFTLPQRMELEQQMLIYNYIRANVPIPANLLSSLR 45 8******************************9886 PP

Sequence ? help Back to Top
Protein Sequence Length: 423 aa Download sequence
MQGVVGGKNV PFTLPQRMEL EQQMLIYNYI RANVPIPANL LSSLRRGLNT SGLSGSYRPN 60 AAWWGYFHPG FAGNADPEPG RCRRTDGKKW RCSRDAVPDQ KYCERHINRG RHRSRKPVEG 120 QGGHAKKPMQ IISNPTSASA VSSGGQSSNE LTVGGKLIQN PQPTADTPPS QLWILAGGKA 180 VNDHGEKAAV PLIVSSTPKP FNSLFSTSKS CSPLELDSGD CLLSQLGGAF AATNNNTNFS 240 SPLELHDWPS SLSDCSTITW PGAAEEMQPE RSQLSLPFPM TSSDFSSSSS SPTAEKLSPL 300 HMGLGIRGFT NELNRFQMSW RSSPWEAPAR ASAAMAGPLG EALASTGAAG MDENKIFLSL 360 MNESWDLSPQ LASSTRTHMQ HTALSSASSA SGNDLAAAEK NTTQEGFSCF FGTKNPNSSS 420 FPL

Sequence ? help Back to Top

Protein Sequence Length: 423 aa Download sequence

MQGVVGGKNV PFTLPQRMEL EQQMLIYNYI RANVPIPANL LSSLRRGLNT SGLSGSYRPN  60
AAWWGYFHPG FAGNADPEPG RCRRTDGKKW RCSRDAVPDQ KYCERHINRG RHRSRKPVEG  120
QGGHAKKPMQ IISNPTSASA VSSGGQSSNE LTVGGKLIQN PQPTADTPPS QLWILAGGKA  180
VNDHGEKAAV PLIVSSTPKP FNSLFSTSKS CSPLELDSGD CLLSQLGGAF AATNNNTNFS  240
SPLELHDWPS SLSDCSTITW PGAAEEMQPE RSQLSLPFPM TSSDFSSSSS SPTAEKLSPL  300
HMGLGIRGFT NELNRFQMSW RSSPWEAPAR ASAAMAGPLG EALASTGAAG MDENKIFLSL  360
MNESWDLSPQ LASSTRTHMQ HTALSSASSA SGNDLAAAEK NTTQEGFSCF FGTKNPNSSS  420
FPL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37740.1	3e-49	GRF family protein