PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA65889.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family C2H2
Protein Properties Length: 431aa    MW: 48221.4 Da    PI: 6.0992
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA65889.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2120.00063347369123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ++C +Cgk Fs+   L  H r+H
  PKA65889.1 347 HECLICGKIFSSGQALGGHKRSH 369
                 78******************999 PP
Sequence ? help Back to Top
Protein Sequence    Length: 431 aa     Download sequence    
MEKDQEHHTH RCRICSKSFP CGRSLGGHMR SHMQFYSSDL ELKRKLKQSR GQVGLGASYG  60
LRENPKRTWR LLDFAEDDPS SCSSRREQQC RQCCKVFPSW KALFGHMRCH SEKTFRRSPE  120
AKKEQEQDQE DEEEEEEEEG SWNEDKIHLS PESFSDDNEP LSLQTAPSRN LKRAFQVIAA  180
AVSSSSITEY EPEQEDVAIS LMMLSRDVGG YSLPPAAESS DKYSVVLEND KFKQSESGDC  240
DYLEEAEFSG NESRRMKNLN SAELGKKRAK LEENEKSKLG SRYQCPSCKK TFHSYQALGG  300
HRASHKRIKG CCLLDNVGGT GSENTSFEHP AAVEESDLGS KKKSRIHECL ICGKIFSSGQ  360
ALGGHKRSHL ASSGTEQTSL IQQQAAAGSE VADLLDLNLP APIDEESSNV NSWWSGDSLK  420
HEQTLVGLIS D
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14248LKRKLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45120.12e-26C2H2 family protein