PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA65525.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family ERF
Protein Properties Length: 396aa    MW: 43680.8 Da    PI: 9.3372
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA65525.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.71.8e-20201251256
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                 +++GVr+++ +g+W+AeIrdp++   rkr++lg+f+taeeAa+ ++ a+++++g+
  PKA65525.1 201 RFRGVRQRP-WGKWAAEIRDPVQ---RKRIWLGTFDTAEEAAAVYDSAALRFRGA 251
                 79*******.**********755...5*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 396 aa     Download sequence    
MPMTSVAASI RSTSPVHTGE VLRSRSAVVK DEFTSGETGE IGKLVGEEDD AGGEIERDEK  60
HVKTGDGAGR ETEMAEKHAR KENGTARETG GDEKHVGKED DRGREPEKAD ESFVPKGDTG  120
RETEELEKPR IPRRRLMRIF FTDADATDSS SCDEEATGES RRQGTKHVRE IKFKDDALNG  180
GRPGKRRSAV EAYVGDYDRK RFRGVRQRPW GKWAAEIRDP VQRKRIWLGT FDTAEEAAAV  240
YDSAALRFRG ADAVTNFPAG KHASKVTGAS PVASASVKRS GDGVRLPGEA DEVNRVNNLD  300
KKNLYESNCL GFGSLVTAKS QKTLVACLKQ ELKHDLKQDY KGNIVCIRED IPCKQKTVKL  360
RGETASILKP GGSLTPTGLI QLRRTAHGWF RKQDCK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.13e-25ERF family protein