PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA65359.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | ERF | ||||||||
Protein Properties | Length: 213aa MW: 23254.2 Da PI: 8.7004 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.9 | 2.5e-18 | 42 | 90 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr ++ +g+Wv+eIr+p++ + r++lg++ t+e+Aa+a++ a+ +++g PKA65359.1 42 YRGVRMRS-WGKWVSEIREPRK---KSRIWLGTYPTPEMAARAHDVAAASIKG 90 9****998.**********843...6**********************99887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 213 aa Download sequence |
MRERQSSPDS SPSMSMIKKP VEKKNAGGKP EQPRNASRRP AYRGVRMRSW GKWVSEIREP 60 RKKSRIWLGT YPTPEMAARA HDVAAASIKG AGAFLNFPEL AASFPRPASL SARDIQAAAA 120 RAAAMDLSPE PPGAARLSGS PSRSSDELSE IVEVPDLDGD FARGGVELPC FHQFETWAYY 180 PPWMDGVDEF GSLSDHLCSP AAASEALLWN LKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G11590.1 | 4e-49 | ERF family protein |