PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA64366.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | BBR-BPC | ||||||||
Protein Properties | Length: 77aa MW: 8747.26 Da PI: 11.2588 | ||||||||
Description | BBR-BPC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GAGA_bind | 104.9 | 2.4e-32 | 23 | 77 | 247 | 301 |
GAGA_bind 247 stkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301 ++kr+gaRiagrKmSqgaf k+LekLa+eG+++ p+DLk +WAkHGtnkfvtir PKA64366.1 23 NAKRKGARIAGRKMSQGAFAKVLEKLAGEGHQFKDPIDLKLFWAKHGTNKFVTIR 77 579***************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 77 aa Download sequence |
MEFTLISPAF RRLCVHALEH NNNAKRKGAR IAGRKMSQGA FAKVLEKLAG EGHQFKDPID 60 LKLFWAKHGT NKFVTIR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68120.1 | 6e-27 | BBR-BPC family protein |