PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA64175.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | YABBY | ||||||||
Protein Properties | Length: 224aa MW: 24475.2 Da PI: 7.5782 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 232.7 | 8.9e-72 | 17 | 184 | 6 | 170 |
YABBY 6 sseqvCyvqCnfCntilavsvPstslfkv.vtvrCGhCtsllsvnlakasqllaaeshldeslkee...lleelkveeenlksnvekeesastsvssek 100 seq+Cyv+CnfC+t+lavsvP++slfk+ vtvrCGhCt+llsvn++ a ++l+ s+++ ++++l e +++++ ++++++ PKA64175.1 17 PSEQLCYVHCNFCDTVLAVSVPYASLFKTsVTVRCGHCTNLLSVNMRGLLLPA-AANQLHLSTHPFlapVQHNLLEELACPPPSLMMDQQCMNQHNVAP 114 68*************************9769************9988776443.444566555554333677776666666666677777777777778 PP YABBY 101 lsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 ++ +ee+p++p v+rPPekrqrvPsaynrfik+eiqrikasnPdi+hreafsaaaknWahfP+ihfgl PKA64175.1 115 PPKAVEEELPQIPVVNRPPEKRQRVPSAYNRFIKDEIQRIKASNPDITHREAFSAAAKNWAHFPHIHFGL 184 89******************************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 224 aa Download sequence |
MSSSSAAFSL DHLSPPPSEQ LCYVHCNFCD TVLAVSVPYA SLFKTSVTVR CGHCTNLLSV 60 NMRGLLLPAA ANQLHLSTHP FLAPVQHNLL EELACPPPSL MMDQQCMNQH NVAPPPKAVE 120 EELPQIPVVN RPPEKRQRVP SAYNRFIKDE IQRIKASNPD ITHREAFSAA AKNWAHFPHI 180 HFGLMPDQAL KKAASVRPPV ADDGLLKDGF YAAAAAANMG IAPF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45190.1 | 1e-75 | YABBY family protein |