PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA63800.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

TCP

Protein Properties

Length: 268aa MW: 28040.6 Da PI: 8.5541

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA63800.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	126.4	2.9e-39	54	141	2	88
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg 88 a+k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti+WLlqqa+p+i+++tg+++++as+ a + ss s++ssg PKA63800.1 54 APKRSSNKDRHTKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGSGTIPASALaAATAATSSISHPSSG 141 789******************************************************************8887666666666666555 PP

Sequence ? help Back to Top
Protein Sequence Length: 268 aa Download sequence
MDPSSKLLLQ DSGKGEPQRE IRELQMAMVP SSASGEDRAL PLSADREDQR KQLAPKRSSN 60 KDRHTKVDGR GRRIRMPALC AARIFQLTRE LGHKSDGETI QWLLQQAEPS IIAATGSGTI 120 PASALAAATA ATSSISHPSS GAAVARPNWS AGLWVPPASG FGGPGFLPPA SNLAGGAGEG 180 LMQRIGLPGL ELPGVNLPQM SFASLLGGHG HQMPGLELGL SQDGHVGVLN PHALSQFYLQ 240 IGQSRGGGSH AQLQQHPLEK NESDGSTQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27010.1	1e-61	TCP family protein