PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA63770.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family GRAS
Protein Properties Length: 507aa    MW: 55062.2 Da    PI: 4.5597
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA63770.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS285.12e-871234861373
        GRAS   1 lvelLlecAeavss..gdlelaqalLarlsel..aspdg.dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                 lv+lL+++Aea++   ++l la+ +Larl+el  ++  g ++++Rla yft AL+  l++           ++++++n se+l a++l++++sP++kf+
  PKA63770.1 123 LVHLLMAAAEALTGghKNLDLARVILARLKELtgCTVGGaTAIERLAGYFTDALQGILNG--------SDQQQEDRQNFSEVLEAFQLLQDMSPCVKFG 213
                 68**********98446777************887777789******************9........4566666788********************* PP

        GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledl 189
                 h+taNqaI+eav+ge+rvH++D+di++G+QW++L+qaL sR+  +  p+lRiT+v ++ +   +  +++etg+rLa fA+++g+pf+f     ++ + +
  PKA63770.1 214 HFTANQAIVEAVAGERRVHVVDYDIMEGVQWASLMQALVSRSdgQTLPHLRITAVTRAGAAgsRPGTVQETGRRLAAFAASVGLPFSFGQCRLESDDRF 312
                 ******************************************655689*********8777888899***********************999999*** PP

        GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh..nsesFlerflealeyysalfdsleaklpreseerikvE 286
                 ++e+ ++ +gEa++ n+++q  r     +s+ s    +L     l +++v++ve+e+ +  +++ F+  f+e l+ ysa+ dslea++p + ++r  +E
  PKA63770.1 313 RPEAVKTVKGEAVVLNCSVQ--RSA---GSVGS----FLAGASVLGARLVTLVEEEVARdeEEGGFVGFFMEELKRYSAIWDSLEAGFPMQGRAREAME 402
                 ******************94..333...55666....*******************988546669********************************** PP

        GRAS 287 rellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveee.sgslvlgWkdrpLvsvSaW 373
                 r +lg++i  +v  + ++ +  +  +e W   le+aGF+ v ls ++++qa+lll  ++ dgyrvee+  + lvl Wk+ +L+s+S+W
  PKA63770.1 403 RLVLGPRIARAVRRAFRRLKDGEVAAEGW---LEAAGFQRVGLSFFNVCQARLLLGLFN-DGYRVEEDePNKLVLSWKSCRLLSASVW 486
                 ************99988866677777778...889************************.******88357899************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 507 aa     Download sequence    
MELAMEDMTE LQFSACSSTC STTIAGEFPW NDWLPDMDWK TFAGGDDDLF KGLFEPMVHD  60
SDELFVSLSP NDWSSTNVSP STTTWPGTPV EESPPVVIPS ATSSPGMPEQ STSAGEDAGG  120
LRLVHLLMAA AEALTGGHKN LDLARVILAR LKELTGCTVG GATAIERLAG YFTDALQGIL  180
NGSDQQQEDR QNFSEVLEAF QLLQDMSPCV KFGHFTANQA IVEAVAGERR VHVVDYDIME  240
GVQWASLMQA LVSRSDGQTL PHLRITAVTR AGAAGSRPGT VQETGRRLAA FAASVGLPFS  300
FGQCRLESDD RFRPEAVKTV KGEAVVLNCS VQRSAGSVGS FLAGASVLGA RLVTLVEEEV  360
ARDEEEGGFV GFFMEELKRY SAIWDSLEAG FPMQGRAREA MERLVLGPRI ARAVRRAFRR  420
LKDGEVAAEG WLEAAGFQRV GLSFFNVCQA RLLLGLFNDG YRVEEDEPNK LVLSWKSCRL  480
LSASVWSAPP PPSPAPTNYS FQARIMF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08250.11e-101GRAS family protein