PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PKA63160.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 234aa MW: 25550.2 Da PI: 9.7771 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 43.3 | 8.9e-14 | 100 | 147 | 3 | 54 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkle 54 +kG+r+++ g+W+AeIr p +lg+++t+eeAa+a+ +a +++ PKA63160.1 100 VKGIRRRP-CGKWAAEIRNP-----IlgVCQWLGTYDTEEEAAQAYREAVRRFQ 147 8*******.7*********8.....557*********************99875 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 234 aa Download sequence |
MIPNAVRHRS VLVPVIRLVL FDVCCSGQCF SCSAPDTRAH ADKTCTVRTA QCPQKSSFQS 60 FTRRVTRATV QDRERAAQTV QSNQLPARAI VRLAGKERTV KGIRRRPCGK WAAEIRNPIL 120 GVCQWLGTYD TEEEAAQAYR EAVRRFQAEK LRLLKSATSQ PVISSASSSP TVTGTTFSHP 180 SPSSVPEKLL ESAGALPASG FEDLPISELF AVHNLEVLTD MDFAGSMKTA ARSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G72360.1 | 7e-16 | ERF family protein |