PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA62729.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family MYB_related
Protein Properties Length: 235aa    MW: 26138.6 Da    PI: 6.5972
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA62729.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding543.9e-1779120447
                      S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       ++ E+ l +d++ qlG++ W++Ia++++ gRt++++k++w+++
       PKA62729.1  79 LSESEENLVIDLHSQLGNR-WSKIAAHLP-GRTDNEIKNHWNTH 120
                      5899***************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MDGRGGQEAH QLHPQQWPVL LESRSQARRS LALFFPISAS PAMNSDASEL RSLGLLRCGK  60
SCRLRWTNYL RPDLKRGLLS ESEENLVIDL HSQLGNRWSK IAAHLPGRTD NEIKNHWNTH  120
IKKKLRKMGI DPLTHRPLPR GDRTPPGVDA LSTADTFFND SPGFCTDEVP MIEPHEIILP  180
SSSSLSSSPF SIESWAAASS SGSNAPGIHL PCIELPESMF FCEADENLIG WDFMS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66230.18e-54MYB family protein