PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA62559.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | ERF | ||||||||
Protein Properties | Length: 177aa MW: 19104.9 Da PI: 11.3862 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 46.1 | 1.2e-14 | 22 | 70 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr +k +grWvAeIr+p++ r r +lg++ + Aa+a++ a l+g PKA62559.1 22 YRGVRMRK-WGRWVAEIREPKK---RSRLWLGSYAAPVAAARAYDTAVYLLRG 70 9*****99.**********965...5*********************998887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 177 aa Download sequence |
MEGDCCSPAG ESRRPPTAER AYRGVRMRKW GRWVAEIREP KKRSRLWLGS YAAPVAAARA 60 YDTAVYLLRG RSARLNFPED LAADEAASGV SGSLSPAAIR RKASEVGARV DAVQQQKQLG 120 PRSPPPTLLP PPAGGGGAEA GPQRASRGPN GSRRVKKIEV CSLTILLSHF SIFILRF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G06746.1 | 1e-31 | ERF family protein |