PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA61943.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family NAC
Protein Properties Length: 293aa    MW: 33959.1 Da    PI: 6.7896
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA61943.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM157.65.1e-49211492128
         NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kge 98 
                  pGfrFhPtdeelv +yL++kve+k+    ++ike+diyk++Pw+Lpk  +  ekewyfF+ r +ky+++ r+nr+t sg+Wkatg d++++s    g 
  PKA61943.1  21 LPGFRFHPTDEELVGFYLRRKVEKKPPLSLDFIKEIDIYKYDPWELPKLSSLWEKEWYFFCLRGRKYRNSIRPNRVTGSGFWKATGIDRPIYSGgnPGD 119
                 59************************777799***************76666899**************************************644445 PP

         NAM  99 lvglkktLvfykgrapkgektdWvmheyrl 128
                  +glkk+Lv+y+g+a +g+ktdW+mhe+rl
  PKA61943.1 120 CIGLKKSLVYYRGSAGRGTKTDWMMHEFRL 149
                 5***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MEKKAEKRER EQNMEEEEVA LPGFRFHPTD EELVGFYLRR KVEKKPPLSL DFIKEIDIYK  60
YDPWELPKLS SLWEKEWYFF CLRGRKYRNS IRPNRVTGSG FWKATGIDRP IYSGGNPGDC  120
IGLKKSLVYY RGSAGRGTKT DWMMHEFRLP AGGETSPPSL HEAETWTICR IFKRNVSMKK  180
LTQQLSRKEA DGGRTPAESS SKTSSLESDN GEEYSRYLGG SSLNGGFVEE NGQRNEGRQW  240
VPNLSPAILD SVTQTNYENW KGNEIFREGN WEEIGRMVDY MMEPANAYDC IYY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43000.12e-83NAC family protein