PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA61822.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

NAC

Protein Properties

Length: 409aa MW: 46021.7 Da PI: 7.6534

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA61822.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	162.7	1.4e-50	89	210	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lppGfrFhPtdeelvv+yL++++++++ +i+evdiyk++PwdLp+k++ +++ewyfFs+r++ky++g r++ra++sgyWkatg+dk++ s ++e PKA61822.1 89 LPPGFRFHPTDEELVVHYLRNRAAASS-----IIAEVDIYKFDPWDLPEKATFGDREWYFFSPRERKYPNGIRPSRAAASGYWKATGTDKAISS-GSES 181 79*****************999877.....599*********998999***********************************9.99 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 vg+kk Lvfykgr p+g kt+W+mheyrl PKA61822.1 182 VGVKKALVFYKGRPPRGLKTNWIMHEYRL 210 ***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 409 aa Download sequence
MNDATNEYDD VGRFFVRKYP AANSIMPSLS SKRTASINPA LIPHYAKISS SASSSSQLVP 60 KPIQYLSDRG GEKTHGGGPP AMSYPAAHLP PGFRFHPTDE ELVVHYLRNR AAASSIIAEV 120 DIYKFDPWDL PEKATFGDRE WYFFSPRERK YPNGIRPSRA AASGYWKATG TDKAISSGSE 180 SVGVKKALVF YKGRPPRGLK TNWIMHEYRL IDDRDSSSYK PKKFRDHSMR LDDLVLCRIY 240 KKSNHLSATM MADREQEDSC ADDACFPQAL PHQDELLKMP KTSSLSELLL EDYSPLLNLH 300 EFDSNPIFGH PISSELLENH SSGSRSSYLL PQLSQVDSPV RRRPPPVENC EENGDCLESL 360 QGSKKVSIFQ SFSGQFDSSQ SNSATTSQPF FSRPFLMNSL LELPDFRFR

Sequence ? help Back to Top

Protein Sequence Length: 409 aa Download sequence

MNDATNEYDD VGRFFVRKYP AANSIMPSLS SKRTASINPA LIPHYAKISS SASSSSQLVP  60
KPIQYLSDRG GEKTHGGGPP AMSYPAAHLP PGFRFHPTDE ELVVHYLRNR AAASSIIAEV  120
DIYKFDPWDL PEKATFGDRE WYFFSPRERK YPNGIRPSRA AASGYWKATG TDKAISSGSE  180
SVGVKKALVF YKGRPPRGLK TNWIMHEYRL IDDRDSSSYK PKKFRDHSMR LDDLVLCRIY  240
KKSNHLSATM MADREQEDSC ADDACFPQAL PHQDELLKMP KTSSLSELLL EDYSPLLNLH  300
EFDSNPIFGH PISSELLENH SSGSRSSYLL PQLSQVDSPV RRRPPPVENC EENGDCLESL  360
QGSKKVSIFQ SFSGQFDSSQ SNSATTSQPF FSRPFLMNSL LELPDFRFR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69490.1	1e-81	NAC family protein