PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA61663.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 71aa MW: 8167.55 Da PI: 10.6176 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 99.9 | 9.9e-32 | 9 | 58 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krienk+nrqvtfskRrngi+KKA+ELSvLCdae+a+iifs +gkl+e+ PKA61663.1 9 KRIENKINRQVTFSKRRNGIMKKAYELSVLCDAEIALIIFSGRGKLFEFG 58 79**********************************************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 71 aa Download sequence |
MGRGRVELKR IENKINRQVT FSKRRNGIMK KAYELSVLCD AEIALIIFSG RGKLFEFGSP 60 EYVRSLDLGF N |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45650.1 | 2e-34 | MIKC_MADS family protein |