PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA61514.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family ERF
Protein Properties Length: 389aa    MW: 42029.2 Da    PI: 6.538
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA61514.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.78e-20201250255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+W+AeIrdp     +  +r++lg+f tae Aa+a+++a+++++g
  PKA61514.1 201 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFETAEAAARAYDEAALRFRG 250
                 7********.**********7.....337*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 389 aa     Download sequence    
MPGRCSTLLK KLMTFFPPIN DCFPHRFKRV DLMCIKVAQP SESDDIQRFL SAGEEEEEEE  60
EGPTAHTAEV TVAVPPPSAC TMLSGFRSEM EISAMVSALT HVVTGGAGGS VRIKREREEV  120
LPETARVFGE YASSAAAGGG GGIRVKRERE VMPLETTLVY RGFGESASSS AVAVEQQFPG  180
RTAPRGAPAS SPETEGGVRR RYRGVRQRPW GKWAAEIRDP HKAARVWLGT FETAEAAARA  240
YDEAALRFRG NRAKLNFPEN VSLRQLQTAA PATQLPESGS PATSTLIKFQ PGDAAGDYLE  300
YSRLLQGAGE YQEVQQPALL LDRLMYPSSS LASSSRSPAS FSLVYPQQTA GGQETSVSQS  360
PSAGILQRMD EVPAPPRTDS LRYPPSCSG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50080.16e-22ERF family protein