PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA61299.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | ERF | ||||||||
Protein Properties | Length: 230aa MW: 25076.4 Da PI: 8.736 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59 | 1.1e-18 | 62 | 110 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+G+r+++ +g+WvAeIr p++ r r++lg+f+ ae+Aa a++aa+ kl+g PKA61299.1 62 YRGIRQRH-WGKWVAEIRLPRN---RSRVWLGTFDKAEDAAVAYDAAAYKLRG 110 9******9.**********955...5*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence |
MSGFPDLEQL IVLSLVSPSL ASTPPFTLLL HPLQPPQPAS TVHQFALSGF HHHPPAPARK 60 IYRGIRQRHW GKWVAEIRLP RNRSRVWLGT FDKAEDAAVA YDAAAYKLRG DFAQLNFPHL 120 KHQLHHRPES AAAVSLLEAK LKSFGFDGSP ASSGSSCSSS SCRGRVMGGG DEAPAKRQKV 180 AEMEGAPARA PAAKEEKVDW DADGLPLSRM PSHDMDSIWD SLLMTANSDS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G13620.1 | 2e-30 | ERF family protein |