PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA61170.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family Trihelix
Protein Properties Length: 368aa    MW: 39335.2 Da    PI: 10.562
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA61170.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix521.9e-1686175186
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 +W++  + aLi+a  e+  +l+rg+lk+++W+ev++++       + +++ +qCk++++ l+k+yk +k     +   +ss++p+f++l+
  PKA61170.1  86 CWSEGATSALIDAWGERFVELSRGNLKQKHWQEVADVVssrdDYSKPHKTDVQCKNRIDTLKKKYKLEKSKIVAGGLSASSSWPFFHRLD 175
                 7*************************************85554455689********************9999997778889******97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 368 aa     Download sequence    
MDDEDDAPSP LPSSPSPSPS LSPSLPPDPV TVVHPSSTPP PHAHLSGSVT VAATGPITHH  60
QTLTLALPIQ NPPGSGNGGG GGRDDCWSEG ATSALIDAWG ERFVELSRGN LKQKHWQEVA  120
DVVSSRDDYS KPHKTDVQCK NRIDTLKKKY KLEKSKIVAG GLSASSSWPF FHRLDVLLGP  180
SIKPSSSSAA GVVAKQPPPA AVAAAARSQF PQKQRTNVQA KRKASSPAAS ASSTSDSFPP  240
APPPPPPPPA SANGRRKGLP VTGLKELTRA ILKFGEVYQR IESSKLQQAM EMERRRMGFA  300
QDLEMQRIQF FMKTQMELSQ LKRRRTSTEA GAKAGGGTGG GSSNHHHSRR PHHQIPGNNH  360
DYASDKRG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G14180.18e-39Trihelix family protein