PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA60953.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family B3
Protein Properties Length: 328aa    MW: 37609.8 Da    PI: 7.5683
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA60953.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B359.36.6e-1939122998
                 HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3   9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                 + + s+ +v+pkkf+ +++g+      + l+ +sg +W v l  rk+ +++ l++GWk+F ++++++e+D+++Fk+dg s+f  +v +f+
  PKA60953.1  39 YGNFSNSMVIPKKFIYHFSGE--LLDAVELKVPSGDKWHVGL--RKTNDGVALERGWKNFIEDHDIQENDTLLFKYDGISSF--LVLMFD 122
                 5566778********777666..5568***************..********************************999999..888887 PP
2B346.27.9e-152483181789
                 E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SE CS
          B3  17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.se 89 
                 ++p kf+e++  ++++++ + l  e+ r W v+l    ++ ++ +++GWk+F ++n+Lk+gD+++F+l g  ++
  PKA60953.1 248 RIPLKFTEDYL-PQTSKTAVLLLPEKTRLWPVQL--IVQKFSFAFSAGWKGFSEDNNLKVGDICLFELLGIqDG 318
                 79*****9994.44566788888899********..66666699***********************9876344 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MEKECKHCRN WMEQCQRFEE HFYWDHVDLE RMHFLKLMYG NFSNSMVIPK KFIYHFSGEL  60
LDAVELKVPS GDKWHVGLRK TNDGVALERG WKNFIEDHDI QENDTLLFKY DGISSFLVLM  120
FDPSGCEKAT AHCSKRRNPL FDFCGTPPGK PSQHRANRNF PRCMSQALSP SSDNGTLRAR  180
KNAEDQHVRV GSVSRKTPAN KKLVDRSNNK ETLNGQESMA TEGAESQSDE VYSDIQFKSI  240
DLIMSPKRIP LKFTEDYLPQ TSKTAVLLLP EKTRLWPVQL IVQKFSFAFS AGWKGFSEDN  300
NLKVGDICLF ELLGIQDGIT IAVHISHL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.15e-33B3 family protein