PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA60952.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family B3
Protein Properties Length: 376aa    MW: 43378.6 Da    PI: 7.7147
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA60952.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B360.82.3e-19431221398
                 TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3  13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                 s+ +v+pkkf++ ++g+      + l+ +sg+ W v l  rk+ ++  l+ GW++F ++++++e+D++vFk+dg+s+f  +v +f+
  PKA60952.1  43 SNSMVIPKKFMDYFSGE--LLEAVELKVPSGNIWHVSL--RKTNDGAALECGWRKFIEDHDIQENDTLVFKYDGNSSF--FVLMFD 122
                 4569*******555555..5568***************..***********************************999..888887 PP
2B361.81.1e-19271364196
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEE CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkv 96 
                 f++ +++ + lk+  +++p kfaee+  +++++  l l  e+ rsW+v+l    +++++ ++ GWkeFvk+n+Lk+g +++F+l g  ++ +  v++
  PKA60952.1 271 FVSFMVRTSILKRFYMSIPMKFAEEYL-PQTSQLALLLLPEKTRSWSVQL--LVQKQSVGFSCGWKEFVKDNNLKVGNVCLFELLGIqDGVTVIVHI 364
                 7788999999****************4.4567789999************..88888899***********************99875666566655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 376 aa     Download sequence    
MGEECKHCKK WKEQCQRFEE HFYWDHVDAT RMHFSKLMFG DFSNSMVIPK KFMDYFSGEL  60
LEAVELKVPS GNIWHVSLRK TNDGAALECG WRKFIEDHDI QENDTLVFKY DGNSSFFVLM  120
FDQGGCEKAA AHCPKRWNPV FNFCESPPGK SSQRRANGFP RYTSQELLPS FDDEMLKARK  180
SSQDKHVRLG SKFRKISSNK KQLVPSNDEE TLNGLDSMTT EGTESPSTEV CLDNQSNFKD  240
VIMSKRLHLT AEEKSKVLSF VETIQTDKPY FVSFMVRTSI LKRFYMSIPM KFAEEYLPQT  300
SQLALLLLPE KTRSWSVQLL VQKQSVGFSC GWKEFVKDNN LKVGNVCLFE LLGIQDGVTV  360
IVHINRSYPT ELVPKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.16e-37B3 family protein