PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA60887.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

FAR1

Protein Properties

Length: 837aa MW: 96174.7 Da PI: 7.2244

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA60887.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	56.1	1.2e-17	80	163	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY++YA +vGF v+++ks s ++g + + +vCs+ g+ + + + r + +t+C+a++ v++++dg ++ + +leHnH+++ PKA60887.1 80 NFYKQYALHVGFGVTVKKSWFS-KSGVCRRLILVCSRGGSGRADACY-----KARLTAKTNCEAMVGVRMWDDGLLHIVETNLEHNHPVS 163 6******************9.7888************9999.....999******************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 837 aa Download sequence
MCMLMMSSVM ETPDATGSEI NEEKINEMNG AVLVDNEGHQ EMVNGFEKEE TKGTVVHDSN 60 FDVKTPCIGM TFKTYDEVSN FYKQYALHVG FGVTVKKSWF SKSGVCRRLI LVCSRGGSGR 120 ADACYKARLT AKTNCEAMVG VRMWDDGLLH IVETNLEHNH PVSPSTAQSL RCYQKMLCKV 180 SPIQSAGHRN SQVIGKDCGY AAQIGRLKLG EEDAAAIHEF FARMQNNNPN FFYSVDLDQH 240 GRMRNLFWAD ARSREASRYF ADVCTLDSSC LTENYDLPLV VFSGMNQHGQ IVLLGCGLLS 300 NENVETYIWL FRTWLTCIAS SHPNAFITDD CKAIQNAIVD VFPEIRHRLC LFHIFKKFPD 360 KLKGSADFMA IRKALKKIVY NSLERNEFEE KWMKTIGEYG LQDNEWLNAL YENRHSWVPL 420 FLKDTFWAGM SVAQRGESLT SYFDGFVFPR TTIKQFLGKY ETIIQSKYKK ESQSDSESFH 480 KAPLIVSKYY MEEQLSKLYT LNMFKKFQDE LKATMYCHAS PIKIDGPLQV FEVKECSYIE 540 NGRRTESKDH EVCFNLEDLA VHCICGFFQF NGILCRHSLS VFKLQQVFEI PPQYILDRWK 600 KDCKRLHRLA HYTEDVMPNN ILGRYDYLSR RFLQLVEIGF LSEERFQVAL KLMRELEISL 660 LDDLECRDKQ PRLLSFETQT SQCIHDLLSS QFGISKVNKS PSSLHAKRRG RPPKKIKEAN 720 VEMLVHANKE QDFLRSSLLG NDNHILQASS AASHLDAHAA SQGGIDLMEE VNPNDMSFGT 780 HFGVHVNHQH LMGGQESMQQ SHLMQTKYDQ QAFQNPARMQ WLYQQNYQEA HIARRTG

Sequence ? help Back to Top

Protein Sequence Length: 837 aa Download sequence

MCMLMMSSVM ETPDATGSEI NEEKINEMNG AVLVDNEGHQ EMVNGFEKEE TKGTVVHDSN  60
FDVKTPCIGM TFKTYDEVSN FYKQYALHVG FGVTVKKSWF SKSGVCRRLI LVCSRGGSGR  120
ADACYKARLT AKTNCEAMVG VRMWDDGLLH IVETNLEHNH PVSPSTAQSL RCYQKMLCKV  180
SPIQSAGHRN SQVIGKDCGY AAQIGRLKLG EEDAAAIHEF FARMQNNNPN FFYSVDLDQH  240
GRMRNLFWAD ARSREASRYF ADVCTLDSSC LTENYDLPLV VFSGMNQHGQ IVLLGCGLLS  300
NENVETYIWL FRTWLTCIAS SHPNAFITDD CKAIQNAIVD VFPEIRHRLC LFHIFKKFPD  360
KLKGSADFMA IRKALKKIVY NSLERNEFEE KWMKTIGEYG LQDNEWLNAL YENRHSWVPL  420
FLKDTFWAGM SVAQRGESLT SYFDGFVFPR TTIKQFLGKY ETIIQSKYKK ESQSDSESFH  480
KAPLIVSKYY MEEQLSKLYT LNMFKKFQDE LKATMYCHAS PIKIDGPLQV FEVKECSYIE  540
NGRRTESKDH EVCFNLEDLA VHCICGFFQF NGILCRHSLS VFKLQQVFEI PPQYILDRWK  600
KDCKRLHRLA HYTEDVMPNN ILGRYDYLSR RFLQLVEIGF LSEERFQVAL KLMRELEISL  660
LDDLECRDKQ PRLLSFETQT SQCIHDLLSS QFGISKVNKS PSSLHAKRRG RPPKKIKEAN  720
VEMLVHANKE QDFLRSSLLG NDNHILQASS AASHLDAHAA SQGGIDLMEE VNPNDMSFGT  780
HFGVHVNHQH LMGGQESMQQ SHLMQTKYDQ QAFQNPARMQ WLYQQNYQEA HIARRTG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	1e-146	FAR1 family protein