PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA60837.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | ERF | ||||||||
Protein Properties | Length: 217aa MW: 23517.5 Da PI: 6.5075 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.7 | 5.2e-17 | 42 | 92 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + ykGVr + rWv+e+r+p +k+ r++lg+f tae+Aa+a++ a+++l+g PKA60837.1 42 PVYKGVRLRG-ARRWVCEVREP---NKKSRIWLGTFPTAEMAARAHDVAALALRG 92 68*******9.8******9998...347*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 217 aa Download sequence |
MNRASTDDPL PASPPDELYA TVLSAPPKRP AGRTKFRETR HPVYKGVRLR GARRWVCEVR 60 EPNKKSRIWL GTFPTAEMAA RAHDVAALAL RGSAACLNFA DSARLLPIPP SPASPRTIRL 120 AAAQAAESFR PGVPLSTTGG AARGGCGGSF REEGCEAAPG AFAAEVGVDY HCSYSVMDFD 180 WYYYDEEPMF FPAATAAAVD WDDGECREDV PLWSHSI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51990.1 | 2e-37 | ERF family protein |