PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA60652.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

bZIP

Protein Properties

Length: 405aa MW: 43348.9 Da PI: 7.1604

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA60652.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	67.7	1.9e-21	299	361	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkr+rrkq+NRe+ArrsR+RK+ae+eeL+ v+ L++eN +L +el+++k e+++l +++ PKA60652.1 299 ERELKRQRRKQSNRESARRSRLRKQAECEELAHCVEGLKEENVSLSEELNKIKMEYKQLLAQN 361 89*********************************************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 405 aa Download sequence
MGNSEADAPA KGPKVSASQD QPSVASTSTT TPVYPDWSTF QAYSPIPPPG FFHSAVASSP 60 PPHPYVWGAQ QFMPPYGTPP PYVMYPHGGI YTHPSMAPVS HPFSPYTMAS PNGDAETSGG 120 VLGSGEAEAK SSEAKEKSPI KKSKGSLGSL NMITGKNSEL CKTSATSANG IFSQSGDSRS 180 EASSEESDAY SENESPQNTS EVQNSSDVTN HRNGNTLHAT SQNGRLSAQS QSMHGQTMPI 240 APMPVPVPPG VVASPTTNLN IGWSASTPLR LPPIRGKVPA TAVAPMVAGA PSELWMQDER 300 ELKRQRRKQS NRESARRSRL RKQAECEELA HCVEGLKEEN VSLSEELNKI KMEYKQLLAQ 360 NTFLKEKLSK VSQGSDNLVH ETNGRHSAGD GHQQNANSDV KINTN

Sequence ? help Back to Top

Protein Sequence Length: 405 aa Download sequence

MGNSEADAPA KGPKVSASQD QPSVASTSTT TPVYPDWSTF QAYSPIPPPG FFHSAVASSP  60
PPHPYVWGAQ QFMPPYGTPP PYVMYPHGGI YTHPSMAPVS HPFSPYTMAS PNGDAETSGG  120
VLGSGEAEAK SSEAKEKSPI KKSKGSLGSL NMITGKNSEL CKTSATSANG IFSQSGDSRS  180
EASSEESDAY SENESPQNTS EVQNSSDVTN HRNGNTLHAT SQNGRLSAQS QSMHGQTMPI  240
APMPVPVPPG VVASPTTNLN IGWSASTPLR LPPIRGKVPA TAVAPMVAGA PSELWMQDER  300
ELKRQRRKQS NRESARRSRL RKQAECEELA HCVEGLKEEN VSLSEELNKI KMEYKQLLAQ  360
NTFLKEKLSK VSQGSDNLVH ETNGRHSAGD GHQQNANSDV KINTN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	316	322	RRSRLRK
2	316	323	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35530.1	4e-74	bZIP family protein