PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA60422.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

TALE

Protein Properties

Length: 536aa MW: 58680.4 Da PI: 6.0076

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA60422.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.5	5.5e-09	332	369	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps ++ LA+++gL+ +qV++WF N R + PKA60422.1 332 FEHflHPYPSDVDKHILARQTGLSRSQVSNWFINARVR 369 664459******************************88 PP
2	BELL	106.2	2.2e-34	194	262	4	72
BELL 4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 elqk+ka LlslleeVd+rY++y+eq+++v+++Feavag g+a+ Y +lA+ka+SrhFrcL+d ia+qi PKA60422.1 194 ELQKRKANLLSLLEEVDRRYRKYCEQMRAVAAAFEAVAGQGAAATYLALASKAMSRHFRCLRDGIAGQI 262 89******************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 536 aa Download sequence
MASQETHHPA ALGYSDFAAA AAGEGYEEAA GHELYSLQTR MEMLGFLSKH NPNSSWRGSP 60 AADPVLIAGE GSWEQPRQLL VDDDSVRCLF PVNGDEPQCQ GLSLSLYNSE PTGGAAASGV 120 EFQQNYSFSA PSAGHKLRSS KYLIPAQELL NEFCDLGGAR AASKQKTKNR RWEEGGSSSS 180 SPINLSLQTL DILELQKRKA NLLSLLEEVD RRYRKYCEQM RAVAAAFEAV AGQGAAATYL 240 ALASKAMSRH FRCLRDGIAG QIQATKKATG DRDPIALQGI STGETPRLKL LDQSFRQQKA 300 FQQSGGILEP HPWRPQRGLP ERSVSILRAW LFEHFLHPYP SDVDKHILAR QTGLSRSQVS 360 NWFINARVRL WKPMIEEMYV EETKEHEEDE EVDRNPNPNP NSSFSIDRTA EQKPLPGDLF 420 SDPESLSSII NAGAGHHPGR REENFGTVDI DFSSFNGCRN GGNGVTLTLG LQQHAGGGGS 480 GGMGFSLSAA NQPPLYYRGQ TPEECQPVQF SVIDGEVQAL PYRNLMGAQL LHDLAG

Sequence ? help Back to Top

Protein Sequence Length: 536 aa Download sequence

MASQETHHPA ALGYSDFAAA AAGEGYEEAA GHELYSLQTR MEMLGFLSKH NPNSSWRGSP  60
AADPVLIAGE GSWEQPRQLL VDDDSVRCLF PVNGDEPQCQ GLSLSLYNSE PTGGAAASGV  120
EFQQNYSFSA PSAGHKLRSS KYLIPAQELL NEFCDLGGAR AASKQKTKNR RWEEGGSSSS  180
SPINLSLQTL DILELQKRKA NLLSLLEEVD RRYRKYCEQM RAVAAAFEAV AGQGAAATYL  240
ALASKAMSRH FRCLRDGIAG QIQATKKATG DRDPIALQGI STGETPRLKL LDQSFRQQKA  300
FQQSGGILEP HPWRPQRGLP ERSVSILRAW LFEHFLHPYP SDVDKHILAR QTGLSRSQVS  360
NWFINARVRL WKPMIEEMYV EETKEHEEDE EVDRNPNPNP NSSFSIDRTA EQKPLPGDLF  420
SDPESLSSII NAGAGHHPGR REENFGTVDI DFSSFNGCRN GGNGVTLTLG LQQHAGGGGS  480
GGMGFSLSAA NQPPLYYRGQ TPEECQPVQF SVIDGEVQAL PYRNLMGAQL LHDLAG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41410.1	4e-94	TALE family protein