PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA60390.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

NAC

Protein Properties

Length: 580aa MW: 65673.4 Da PI: 4.8396

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA60390.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	170.6	5e-53	40	165	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 ppGfrFhPtdeelv +yL++k+ +++++l +i e+d+yk+ePw+Lp k++ ++k+w+fFs+rd+ky++g+r+nratk+gyWkatgkd+++ + ++++ PKA60390.1 40 PPGFRFHPTDEELVLYYLRRKICRRRIKL-AMIGEIDVYKWEPWELPeKSMLRRDKQWFFFSPRDRKYPNGSRSNRATKHGYWKATGKDRTISH-NSKA 136 8**************************.88***********767778999**********************************9.999 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 g kktLv+y+grapkg++tdWvmhey+l PKA60390.1 137 AGNKKTLVYYRGRAPKGQRTDWVMHEYTL 165 ***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 580 aa Download sequence
MVMEEKESRL RGSRRVSNSD DGDDNGEDVN RLLGDPKGWP PGFRFHPTDE ELVLYYLRRK 60 ICRRRIKLAM IGEIDVYKWE PWELPEKSML RRDKQWFFFS PRDRKYPNGS RSNRATKHGY 120 WKATGKDRTI SHNSKAAGNK KTLVYYRGRA PKGQRTDWVM HEYTLDEMLL LHFNNAQARL 180 SVIVILYSIP LNQRPSGSYH FTADSYALYK LFMKSGPGPK NGEQYGAPFR EEEWEEDDDT 240 VQESSMNHKN GEELSHNVLT CDSITRRLIR EEEDNILQIG ELEELLLQMS NEQNVVRGPL 300 DFSAYASQVD LEPETKSLIV DPSYVDTHCF QNMESGVANS LPIELPEISS KQQIVIADDE 360 FLEIEDLIDP EASCCLDDIS IGNLVHDDEF YDPYDHFDAN MLLSDSMGLP PLDAMNNYIV 420 EGPQHLAASH VTGEIWTNEE IHNLSTIANA NQVLLDPPAS DGPLISNMRN ATKSHPENPS 480 PSWFSSALSA FLDSVPSSPA LASENALISR AIERVSSFRS KQIHALEPDT HSGGSSNNTG 540 IRQQVNDRGF LFVSFVVGIT AVFWVFTIGA AVKVFKGFWG

Sequence ? help Back to Top

Protein Sequence Length: 580 aa Download sequence

MVMEEKESRL RGSRRVSNSD DGDDNGEDVN RLLGDPKGWP PGFRFHPTDE ELVLYYLRRK  60
ICRRRIKLAM IGEIDVYKWE PWELPEKSML RRDKQWFFFS PRDRKYPNGS RSNRATKHGY  120
WKATGKDRTI SHNSKAAGNK KTLVYYRGRA PKGQRTDWVM HEYTLDEMLL LHFNNAQARL  180
SVIVILYSIP LNQRPSGSYH FTADSYALYK LFMKSGPGPK NGEQYGAPFR EEEWEEDDDT  240
VQESSMNHKN GEELSHNVLT CDSITRRLIR EEEDNILQIG ELEELLLQMS NEQNVVRGPL  300
DFSAYASQVD LEPETKSLIV DPSYVDTHCF QNMESGVANS LPIELPEISS KQQIVIADDE  360
FLEIEDLIDP EASCCLDDIS IGNLVHDDEF YDPYDHFDAN MLLSDSMGLP PLDAMNNYIV  420
EGPQHLAASH VTGEIWTNEE IHNLSTIANA NQVLLDPPAS DGPLISNMRN ATKSHPENPS  480
PSWFSSALSA FLDSVPSSPA LASENALISR AIERVSSFRS KQIHALEPDT HSGGSSNNTG  540
IRQQVNDRGF LFVSFVVGIT AVFWVFTIGA AVKVFKGFWG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34190.1	4e-69	NAC family protein