PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA60170.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | G2-like | ||||||||
Protein Properties | Length: 124aa MW: 13731.7 Da PI: 11.1356 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 89.6 | 2.9e-28 | 64 | 113 | 2 | 51 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 rlrWtp+LH +Fv+av++LGG+++AtPk +l++m+vkgL+++hvkSHLQ PKA60170.1 64 RRLRWTPNLHLSFVRAVDRLGGQDRATPKLVLQMMNVKGLSIAHVKSHLQ 113 69************************************************ PP | |||||||
2 | Myb_DNA-binding | 45.3 | 2e-14 | 65 | 113 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwq 45 r+rWT+ +++ +v+av +lGg t+k++ ++m+ kg++ ++ks++q PKA60170.1 65 RLRWTPNLHLSFVRAVDRLGGQdraTPKLVLQMMNvKGLSIAHVKSHLQ 113 89**********************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 124 aa Download sequence |
MRSKKKDKAL EINDKEEKKE GSSGGKKLPN SDSKGDDTGS RKSVVEGKDS PKTITGGQSR 60 LNMRRLRWTP NLHLSFVRAV DRLGGQDRAT PKLVLQMMNV KGLSIAHVKS HLQVKINSFF 120 STAN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G42660.1 | 1e-28 | G2-like family protein |