PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA59606.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family ERF
Protein Properties Length: 477aa    MW: 51096.9 Da    PI: 8.6327
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA59606.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2605.5e-19226276256
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                  y+GVr+++ +g+WvAeIr p++   r+r +lg+f+tae+Aa a+++ + kl+ge
  PKA59606.1 226 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEDAALAYDREAFKLRGE 276
                 59******9.**********955...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 477 aa     Download sequence    
MEGARKVGGG MQRGGSGEDG RRLKGKGVLQ LETVTGRMVA ERQAQAPAPV FSEAPAAFRP  60
LKKIRSPDRY SSNPVSPSSS SSLPVLASAS SSWTSPPIFP FACEASPSPA QSPVLPLFPS  120
NQHYHQQQMI SFSQNQSYPM GSFPTSSSSS PLLLREASSA IATTQQQLYS EQLLRYWSEV  180
LNLSPRGHMM MMSRLAGQEG RGRSPSSLYS SLFRHPFRGV PAPAKLYRGV RQRHWGKWVA  240
EIRLPRNRTR LWLGTFDTAE DAALAYDREA FKLRGENARL NFPNLFLGKS AAGDSSGVGG  300
SREGASSSSS SISAPPTPDD PLPEPRGQRR HRPPDSVDGD RPGQTLLEKE TKTDDAPSSK  360
HEGSPLRESP VEPATATGTV MAGHCSAGTE LVWSEAEEAW FSAWGPGSSL WDDIDGAGSL  420
LFQSRLASVP EIPQEIANAA GEPATAPAQG TDAAAASSSS SPSSLSYPSS IFMWKDP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20880.17e-40ERF family protein