PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA58962.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family bHLH
Protein Properties Length: 314aa    MW: 34273.1 Da    PI: 5.8059
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA58962.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.93.8e-1396145355
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +h  +Er+RR+++N+ ++ Lr+l+P     + k+ + a+i   +v+YIk+Lq
  PKA58962.1  96 SSHITVERNRRKQMNEHLSVLRSLMPCF---YVKRGDQASIIGGVVDYIKELQ 145
                 5899***********************9...9********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MGDALSEIFD DRELTRSSNL AGTASPENLF SILELLEDDA ARSIPPIFCP FDQPAVLVSP  60
NATGDFIRRA DTDEDEDDEA GARRKKIKLD GTAATSSHIT VERNRRKQMN EHLSVLRSLM  120
PCFYVKRGDQ ASIIGGVVDY IKELQQVLQS LEAKKQRKVY SPRTAGSPRP PLPPAASPRL  180
SPLCSPRLVL PISPSTPPPG SPYRPRIQQT HEASPPLEAS AEVAACSKSP VARVEVKFAG  240
PNLVLKTVSN RIPGQAVKII AVLEGLALEI IRVTISTVED ALLFSFTVKI GIECELSAEE  300
LAEEVQRTFS HIYN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06120.12e-48bHLH family protein