PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA58526.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | WOX | ||||||||
Protein Properties | Length: 148aa MW: 15830.8 Da PI: 9.7422 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 25.6 | 2.2e-08 | 8 | 40 | 29 | 57 |
HHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 29 ereeLAkkl....gLterqVkvWFqNrRakekk 57 e ++ k l ++ +++V++WFqNrR + ++ PKA58526.1 8 ETVRIRKLLekfgSVGDANVFYWFQNRRSRSRR 40 55555555555578999*************997 PP | |||||||
2 | Wus_type_Homeobox | 63.4 | 4.6e-21 | 1 | 42 | 24 | 65 |
Wus_type_Homeobox 24 lrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +++P+k+e+ ri++ Le++G ++d+NVfyWFQNr++R+r++q PKA58526.1 1 MVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQ 42 78**************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 148 aa Download sequence |
MVNPPKDETV RIRKLLEKFG SVGDANVFYW FQNRRSRSRR RQRQIQAAIA AASSDSGTHP 60 GGGGGCASAT PSLVITSPSS SASTSSPVTV LINGVPLEVP RGPFDMRAMF GCDSVLFHSS 120 GGALPVDEHG VLSQSLQMGE SYYLVRFN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G17810.1 | 4e-17 | WOX family protein |