PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA57884.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

G2-like

Protein Properties

Length: 536aa MW: 59615.9 Da PI: 5.5867

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA57884.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	85.9	4e-27	107	160	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+++LH++Fv av++L G++kA+Pk++l+lm+v+gLt+e+v+SHLQk+R PKA57884.1 107 KPRVVWATDLHQNFVAAVNHL-GIDKAVPKKVLDLMNVPGLTRENVASHLQKFRQ 160 79*****************.******************************5 PP
2	Myb_DNA-binding	32.5	2e-10	109	159	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W t++++ +v av+ lG + +k++ m+ g+t++++ s++qk++ PKA57884.1 109 RVVWATDLHQNFVAAVNHLGIDkaVPKKVLDLMNvPGLTRENVASHLQKFR 159 678**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 536 aa Download sequence
MSSDFRTDIV MEGIKHGACD YLIKPVREEE LQNVWQHIIR RKFCDGIRME TLNGPERDDR 60 SKQTSEHGKD ALPMGTGSTA DSKNKKKRSF KQFNAREKKE GGFAPKKPRV VWATDLHQNF 120 VAAVNHLGID KAVPKKVLDL MNVPGLTREN VASHLQKFRQ FLKKLIGVDM NRNGHPEAND 180 DARLCFQGFI ITEEIAQEAL AAIQNGFINE RPTSLEKLTS TKSVIQPESL EGSGSSVGVK 240 GFPGFSGSEP LPKPIVSDNV PFCLVDNAKA LVTASERNPI RSHPVTDFHW NNTYYLNQKP 300 ISVSLQPSIC LQTEDNQLQL NFGTMSTLDR QTSSCPVSVD FHGGNQFSSS NNTEVIPSQQ 360 LTSQQSRPHT ANFTAVDTPP PSSTCPQQMN ESFDINASQH VTMNEGLLPP STANLQYLMM 420 QELDEQSGNV NINHFPDSIS SLQSSTGNLN ECHLIHGYEG KEEMQSNLME ELNISFVGES 480 LTIANQFTGK SSQNQPCFWS PGIVDEREVE HDNFYLNLIC SPKAEDSVLE LLIIPQ

Sequence ? help Back to Top

Protein Sequence Length: 536 aa Download sequence

MSSDFRTDIV MEGIKHGACD YLIKPVREEE LQNVWQHIIR RKFCDGIRME TLNGPERDDR  60
SKQTSEHGKD ALPMGTGSTA DSKNKKKRSF KQFNAREKKE GGFAPKKPRV VWATDLHQNF  120
VAAVNHLGID KAVPKKVLDL MNVPGLTREN VASHLQKFRQ FLKKLIGVDM NRNGHPEAND  180
DARLCFQGFI ITEEIAQEAL AAIQNGFINE RPTSLEKLTS TKSVIQPESL EGSGSSVGVK  240
GFPGFSGSEP LPKPIVSDNV PFCLVDNAKA LVTASERNPI RSHPVTDFHW NNTYYLNQKP  300
ISVSLQPSIC LQTEDNQLQL NFGTMSTLDR QTSSCPVSVD FHGGNQFSSS NNTEVIPSQQ  360
LTSQQSRPHT ANFTAVDTPP PSSTCPQQMN ESFDINASQH VTMNEGLLPP STANLQYLMM  420
QELDEQSGNV NINHFPDSIS SLQSSTGNLN ECHLIHGYEG KEEMQSNLME ELNISFVGES  480
LTIANQFTGK SSQNQPCFWS PGIVDEREVE HDNFYLNLIC SPKAEDSVLE LLIIPQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01760.1	4e-45	ARR-B family protein