PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA57884.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | G2-like | ||||||||
Protein Properties | Length: 536aa MW: 59615.9 Da PI: 5.5867 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 85.9 | 4e-27 | 107 | 160 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+++LH++Fv av++L G++kA+Pk++l+lm+v+gLt+e+v+SHLQk+R PKA57884.1 107 KPRVVWATDLHQNFVAAVNHL-GIDKAVPKKVLDLMNVPGLTRENVASHLQKFRQ 160 79*******************.********************************5 PP | |||||||
2 | Myb_DNA-binding | 32.5 | 2e-10 | 109 | 159 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W t++++ +v av+ lG + +k++ m+ g+t++++ s++qk++ PKA57884.1 109 RVVWATDLHQNFVAAVNHLGIDkaVPKKVLDLMNvPGLTRENVASHLQKFR 159 678**********************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 536 aa Download sequence |
MSSDFRTDIV MEGIKHGACD YLIKPVREEE LQNVWQHIIR RKFCDGIRME TLNGPERDDR 60 SKQTSEHGKD ALPMGTGSTA DSKNKKKRSF KQFNAREKKE GGFAPKKPRV VWATDLHQNF 120 VAAVNHLGID KAVPKKVLDL MNVPGLTREN VASHLQKFRQ FLKKLIGVDM NRNGHPEAND 180 DARLCFQGFI ITEEIAQEAL AAIQNGFINE RPTSLEKLTS TKSVIQPESL EGSGSSVGVK 240 GFPGFSGSEP LPKPIVSDNV PFCLVDNAKA LVTASERNPI RSHPVTDFHW NNTYYLNQKP 300 ISVSLQPSIC LQTEDNQLQL NFGTMSTLDR QTSSCPVSVD FHGGNQFSSS NNTEVIPSQQ 360 LTSQQSRPHT ANFTAVDTPP PSSTCPQQMN ESFDINASQH VTMNEGLLPP STANLQYLMM 420 QELDEQSGNV NINHFPDSIS SLQSSTGNLN ECHLIHGYEG KEEMQSNLME ELNISFVGES 480 LTIANQFTGK SSQNQPCFWS PGIVDEREVE HDNFYLNLIC SPKAEDSVLE LLIIPQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G01760.1 | 4e-45 | ARR-B family protein |