PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA56820.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family ERF
Protein Properties Length: 341aa    MW: 36414.5 Da    PI: 10.1949
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA56820.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.42.1e-19137186255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+W+AeIrdp     +  +r++lg+f tae Aa+a+++a+ +++g
  PKA56820.1 137 RYRGVRQRP-WGKWAAEIRDP-----HraARVWLGTFETAEAAARAYDEAAIRFRG 186
                 7********.**********7.....338************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MSPEPVIRTL SGLNNAREMS AMVSVLTRVV SGGQRGTSSG EPVMATGALL TSRSLPSTFS  60
SATEALPWSC FTSLGGHGCA GGGMKREREE LTPDWVGYHR RLGEHGSSPG ESPSSASATV  120
PLEAEQSSAA DRGVHRRYRG VRQRPWGKWA AEIRDPHRAA RVWLGTFETA EAAARAYDEA  180
AIRFRGNRAK LNFPESARLQ QTLGSSPATR LQQRPLVRFQ SLDAASDYVE YSRLLQGTGE  240
YGSLPPTALL NRLIRSSSSM ASSSHSTLSF ASQSMARGSS FTLASSSSPL LHPLFRTPAS  300
ATGEQIVTFR QPGEGASQSR QLFPATSSTD SGDHQPPSCS G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50080.18e-29ERF family protein