PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA56429.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family ERF
Protein Properties Length: 326aa    MW: 35897.2 Da    PI: 6.3222
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA56429.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.14.4e-18122171255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+++AeIrdp+    r  r +lg+++taeeAa  ++ a+ +l+g
  PKA56429.1 122 RYRGVRRRP-WGKYAAEIRDPV----RgVRLWLGTYDTAEEAALVYDSAAIQLRG 171
                 7********.**********63....56*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MPAAMEIKHT VHLDVISKPL LPPNHRHRLT AASPARLDCA AGEPGVPRTV RIFCEDHDAT  60
DSSSGEEIGC PRRRVKRYVQ EIRFEKRPAR PSAAAEGQLK RKRKKSGASS PRTLPSPTGT  120
RRYRGVRRRP WGKYAAEIRD PVRGVRLWLG TYDTAEEAAL VYDSAAIQLR GPGATTNFAG  180
RPPEPAPLTN VSSSVGYESS EESQNISSPT SVLRHLSSAS VAHAPEKPAG RFAVLPEELS  240
GETMPFDETP LFSELLDFGA SQPKLFEESP PRLIFFSDHQ SLPDSGFDFR SPSTCQEDES  300
DDFFSEIGDL FTLDPLVDQF IADPIC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1101105RKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.13e-37ERF family protein