PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA56083.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

G2-like

Protein Properties

Length: 362aa MW: 39667.3 Da PI: 8.6742

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA56083.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102.2	3.2e-32	198	251	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ PKA56083.1 198 PRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 251 9****************************************************7 PP
2	Myb_DNA-binding	46.9	6.4e-15	199	250	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ PKA56083.1 199 RMRWTSTLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 250 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 362 aa Download sequence
MMQLQESFMD PSSTTAAPFP DLSLHISPPG GNSNGGTSAH TELSLASPLA GSNARPRRPH 60 GCIASPAAAA PPPPQPPPEA WSDGGDTRPI KGIPIYNNIN PFTLLPQMAS TYPSFMSTSN 120 LDSPAAGFLS QFTGAQPSGS AYHRLLPPGA ARFNLGQNYH QYHHHFGFGS GFENSSSLMR 180 SRLMSAKNIP AKRSVRAPRM RWTSTLHARF VHAVELLGGH ERATPKSVLE LMDVKDLTLA 240 HVKSHLQMYR TVKTTDKAAA SSDVSGEEDF IRDLSFQTLM EDNKRSNNKL ITEKWSNSSS 300 RGAWLQSNSD DMEDDRPAKC LSEGSGQLLS PTASPRYLKE FENPSLEFTL GRPDWHRRRE 360 DS

Sequence ? help Back to Top

Protein Sequence Length: 362 aa Download sequence

MMQLQESFMD PSSTTAAPFP DLSLHISPPG GNSNGGTSAH TELSLASPLA GSNARPRRPH  60
GCIASPAAAA PPPPQPPPEA WSDGGDTRPI KGIPIYNNIN PFTLLPQMAS TYPSFMSTSN  120
LDSPAAGFLS QFTGAQPSGS AYHRLLPPGA ARFNLGQNYH QYHHHFGFGS GFENSSSLMR  180
SRLMSAKNIP AKRSVRAPRM RWTSTLHARF VHAVELLGGH ERATPKSVLE LMDVKDLTLA  240
HVKSHLQMYR TVKTTDKAAA SSDVSGEEDF IRDLSFQTLM EDNKRSNNKL ITEKWSNSSS  300
RGAWLQSNSD DMEDDRPAKC LSEGSGQLLS PTASPRYLKE FENPSLEFTL GRPDWHRRRE  360
DS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16560.1	8e-52	G2-like family protein