PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA56082.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family BBR-BPC
Protein Properties Length: 352aa    MW: 38995.9 Da    PI: 10.2547
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA56082.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind294.54.1e-90623521301
   GAGA_bind   1 mdddgsre.rnkg.yyepaaslkenlglqlmssiaerdaki..........rernlalsekkaavaerd..maflqrdkalaernkalverd..nklla 83 
                 mdddg    +n+g y++p   +k nlglqlmss+aerdak           r     ++ + +++ +    ++f  rd + ++      +rd   k+l+
  PKA56082.1  62 MDDDGALGnQNWGgYFRPP-PIKGNLGLQLMSSVAERDAKSfisgsaggggRGGRGFFHRECGVLEPSAmsVDF-VRDVWYHN------NRDggGKMLH 152
                 8999987669***999988.9*******************9887777766644444355555555555533456.89***999......4441145666 PP

   GAGA_bind  84 lllvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkes 182
                 + + ++++   + ++   l++t+s+    q     + ++ +  + e   +++ +ee+++++k++k +     ++  k+++ +k+kk  +++++ ++++s
  PKA56082.1 153 VFQGNHQQL--SHHYGALLPETSSVPAAFQ-----MMEQVEA-PME--EKVPVVEESVPVKKRSKGQ-----GRPSKASRPNKTKK-ANATRDGSANPS 235
                 655555543..3347778899999986554.....2222222.111..1334444444444444333.....34455555556555.445556666666 PP

   GAGA_bind 183 aderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsn 281
                    ++++ kk++d+v+ng++lD s++P+PvC+CtG+ +qCY+WG+GGWqSaCCtt iS+yPLP+stkrrg+RiagrKmSqgafkk+LekLa+eG d+s 
  PKA56082.1 236 --AKVRSVKKKMDMVINGIDLDLSGMPAPVCTCTGQGQQCYRWGAGGWQSACCTTIISMYPLPMSTKRRGTRIAGRKMSQGAFKKVLEKLAGEGQDFSS 332
                 ..579********************************************************************************************** PP

   GAGA_bind 282 pvDLkdhWAkHGtnkfvtir 301
                 p+DLk +WAkHGtnkfvtir
  PKA56082.1 333 PIDLKPFWAKHGTNKFVTIR 352
                 *******************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    
MLCFTEIFLR QRTLGRKELF YPRTAGIEQI CSQPKIPFCS SITPHFRRFF QICCRFFGEI  60
WMDDDGALGN QNWGGYFRPP PIKGNLGLQL MSSVAERDAK SFISGSAGGG GRGGRGFFHR  120
ECGVLEPSAM SVDFVRDVWY HNNRDGGGKM LHVFQGNHQQ LSHHYGALLP ETSSVPAAFQ  180
MMEQVEAPME EKVPVVEESV PVKKRSKGQG RPSKASRPNK TKKANATRDG SANPSAKVRS  240
VKKKMDMVIN GIDLDLSGMP APVCTCTGQG QQCYRWGAGG WQSACCTTII SMYPLPMSTK  300
RRGTRIAGRK MSQGAFKKVL EKLAGEGQDF SSPIDLKPFW AKHGTNKFVT IR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14685.11e-72BBR-BPC family protein