PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA55830.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

G2-like

Protein Properties

Length: 394aa MW: 42981.9 Da PI: 8.7764

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA55830.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	95.6	3.9e-30	48	99	1	52
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQk 52 ++rlrWt+eLHerFv+av+qLGG+++AtPk +l++m+v+gLt++hvkSHLQ+ PKA55830.1 48 RQRLRWTHELHERFVDAVTQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQR 99 58*************************************************8 PP
2	Myb_DNA-binding	58.8	1.2e-18	50	100	1	47
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqky 47 r+rWT e++e++vdav+qlGg+ t+k + r mg g+t +++ks++q + PKA55830.1 50 RLRWTHELHERFVDAVTQLGGPdraTPKGVLRVMGvPGLTIYHVKSHLQRH 100 89**********************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 394 aa Download sequence
MYQPKHISSL SSAHTNGIVL DQQMEFSGNT VGPNGSLNNS NNSNLSSRQR LRWTHELHER 60 FVDAVTQLGG PDRATPKGVL RVMGVPGLTI YHVKSHLQRH SGANNDLRSC PLDAVPALRP 120 ASPLLALPCM LALLLLSFPP HPQPRLLCRL SLMCRLAAAA LVHCVRASPS LTTPLRPALT 180 STLAALHRLL ASSRVAPLAL LLHTQLDDFD FQKALENLFQ VQRQLQLRIE AQGKYLKKII 240 EEQQRLSGVL AETPGMSLPP PPSSIDFCHD LEHTDPSTPT RESPHKEKSS IGKHMKAANA 300 LLKCNSREDS FRREPLTPDS SFHSSGSPER LMKRQRSSGS ARDLILGHRI LESSSGSEFQ 360 LNCSLFPVGG SHIDSSGTSV GDDDQFGTAS GSEI

Sequence ? help Back to Top

Protein Sequence Length: 394 aa Download sequence

MYQPKHISSL SSAHTNGIVL DQQMEFSGNT VGPNGSLNNS NNSNLSSRQR LRWTHELHER  60
FVDAVTQLGG PDRATPKGVL RVMGVPGLTI YHVKSHLQRH SGANNDLRSC PLDAVPALRP  120
ASPLLALPCM LALLLLSFPP HPQPRLLCRL SLMCRLAAAA LVHCVRASPS LTTPLRPALT  180
STLAALHRLL ASSRVAPLAL LLHTQLDDFD FQKALENLFQ VQRQLQLRIE AQGKYLKKII  240
EEQQRLSGVL AETPGMSLPP PPSSIDFCHD LEHTDPSTPT RESPHKEKSS IGKHMKAANA  300
LLKCNSREDS FRREPLTPDS SFHSSGSPER LMKRQRSSGS ARDLILGHRI LESSSGSEFQ  360
LNCSLFPVGG SHIDSSGTSV GDDDQFGTAS GSEI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	1e-28	G2-like family protein