PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PKA55818.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 143aa MW: 16916.4 Da PI: 10.0518 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 47 | 5.7e-15 | 23 | 81 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 ++ +r+++NRe+ArrsR RK+++++ L +v+ L++eN++ ++++ ++++ k++s++ PKA55818.1 23 RKRKRMESNRESARRSRMRKQQRLDDLLHEVARLKNENSQIEMQISMFTQQYLKVESNN 81 5789*************************************************999987 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 143 aa Download sequence |
MSPKPARQFS SSEEDSRPGI DERKRKRMES NRESARRSRM RKQQRLDDLL HEVARLKNEN 60 SQIEMQISMF TQQYLKVESN NSILRTQVME LTDRLRYLNS VLRFIEQLSG MSMEIQEIPD 120 PLLKPWQLPC QTHPIIASAN MLQ |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 36 | 43 | RRSRMRKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G62420.1 | 8e-48 | bZIP family protein |