PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA55716.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | B3 | ||||||||
Protein Properties | Length: 165aa MW: 18605.4 Da PI: 7.8463 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 41.8 | 1.9e-13 | 82 | 146 | 33 | 98 |
-SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 33 sktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 s +++ ++++W v++++ +++++ + +GW++F +n+L+ gD +vF+l++ +e +++v++++ PKA55716.1 82 SPSVVVLCYQNQEWAVNFNVyANNRKA--FVGGWRQFSVDNNLRIGDACVFELIDAKELRMRVQILN 146 33688888899*******663555544..557**********************99*******9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 165 aa Download sequence |
MIIFQVRKSA RLLKQNLSRQ DNCLSPKSTQ CINADPDASF SQAEILPLEG KPYFSLIIGR 60 SQLDKPYCVI VPDSIHNFLP ESPSVVVLCY QNQEWAVNFN VYANNRKAFV GGWRQFSVDN 120 NLRIGDACVF ELIDAKELRM RVQILNGQVP ARSHVGNADI PIIID |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G33280.1 | 4e-09 | B3 family protein |