PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA55715.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | B3 | ||||||||
Protein Properties | Length: 159aa MW: 18487.4 Da PI: 9.6432 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 43.5 | 5.7e-14 | 64 | 140 | 16 | 98 |
EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 16 lvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 lv+p +f + + ++++ +l ++++W v + +rk+ vl +GW++F+ +n+L+ gD +vF+l++ ++ ++v++++ PKA55715.1 64 LVIPANFHQFL---PSCNTKAIL-WHQSKEWVVDYVIRKT--YKVLNGGWRKFATDNNLRLGDACVFELMDAEKVMFRVQILD 140 78888885322...345555554.4589*******55444..578************************99899989999887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 159 aa Download sequence |
MIGVRRSKRL LKQSQDGCLS QESTQRVSVE AGASFSQAEI FPLQGKPYFT YIIWKYQINK 60 PFYLVIPANF HQFLPSCNTK AILWHQSKEW VVDYVIRKTY KVLNGGWRKF ATDNNLRLGD 120 ACVFELMDAE KVMFRVQILD GQLPERREGV RAEIPILID |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G09780.1 | 2e-07 | B3 family protein |