PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA55613.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | C2H2 | ||||||||
Protein Properties | Length: 120aa MW: 13944.5 Da PI: 9.1668 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.1 | 0.00062 | 35 | 58 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 +kC+ C+k s+ + H H PKA55613.1 35 FKCHVCHKKLSTAGGMAIHVLQvH 58 89***********99999987655 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 120 aa Download sequence |
MGKKKKRPSK VWCYYCDREF DDEKILVQHQ KAKHFKCHVC HKKLSTAGGM AIHVLQVHKE 60 NVTKYRSDCP PNLCLFPVRL ALNLCLISGC VVEMVPFCLS TRIPSAYTER FEGLYLLQRE |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 3 | 33 | KKKKRPSKVWCYYCDREFDDEKILVQHQKAK |
2 | 4 | 34 | KKKKRPSKVWCYYCDREFDDEKILVQHQKAK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G30970.1 | 7e-40 | C2H2 family protein |