PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA55157.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | ERF | ||||||||
Protein Properties | Length: 220aa MW: 24188.1 Da PI: 8.8323 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 50 | 7.3e-16 | 79 | 130 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 ++kGVr+++ +grW+AeIr p++ + r +lg+f t+ eA +a+ aa+++l +e PKA55157.1 79 KHKGVRRRRPSGRWAAEIRRPVS---NERLWLGTFPTESEAVEAYRAAARRLQNE 130 89******************765...3**********88************9876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 220 aa Download sequence |
MGRPKLRAAK VWPLKKTKSR IFRIVYDDPD ATESSGDERG GVSRRKRTVQ EFLFSACSAK 60 IVPSASTRSS TSPSGKRNKH KGVRRRRPSG RWAAEIRRPV SNERLWLGTF PTESEAVEAY 120 RAAARRLQNE KEACGSAGSA AEGFLSASLP PLDELDPPLF TGEDDCRTGG LETVGLQDAL 180 GIGFDSYFLW GELSAEFWPG SAYVANDWAS VAEIEEIFAN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 77 | 87 | RNKHKGVRRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46310.1 | 3e-09 | ERF family protein |