PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA54657.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

Protein Properties

Length: 365aa MW: 40651.8 Da PI: 7.256

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA54657.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	59.7	5.1e-19	260	352	2	91
EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE. CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefe 91 +kvl++sdv+++gr+vlpk+ ae h +++ + ++ + +ed ++++W++++++ ++ks++y+l+ ++ +Fv++ngL+egDf+v++ ++ ++++ PKA54657.1 260 QKVLKQSDVGNLGRIVLPKREAEIHlpELDARDGISIEMEDiGTSQVWNMRYRFwpNNKSRMYLLE-NTGDFVRSNGLQEGDFIVIY--SDvKCGK 352 79******************99999999*******7777***99777777777777.*****************9..4446664 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
MEADDLIFSD DAFPSLPDFP CLSSPAASPS PSEAAALSAQ SKAASNSSNS SSSSSSSQPA 60 SRDAPMAVPE NSDPPQAVDG DGSFDILGGI DLFPDSWDSE TALLDGEGAG VDLKPPVDEE 120 VLGLFAGEKD DGNSPSEDLA KVFLDWLRNN KDSISLADLR SIKLKRSTVE CAARRLGGGK 180 QGRVQLLKLI LVWVQNHHLQ KRRHRNRLTV PLGIASATKE ARKRRMARQR RFSSLHHHKT 240 QQINQQQGWK AEKNLRFLLQ KVLKQSDVGN LGRIVLPKRE AEIHLPELDA RDGISIEMED 300 IGTSQVWNMR YRFWPNNKSR MYLLENTGDF VRSNGLQEGD FIVIYSDVKC GKYVRLNFYM 360 HTFYL

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

MEADDLIFSD DAFPSLPDFP CLSSPAASPS PSEAAALSAQ SKAASNSSNS SSSSSSSQPA  60
SRDAPMAVPE NSDPPQAVDG DGSFDILGGI DLFPDSWDSE TALLDGEGAG VDLKPPVDEE  120
VLGLFAGEKD DGNSPSEDLA KVFLDWLRNN KDSISLADLR SIKLKRSTVE CAARRLGGGK  180
QGRVQLLKLI LVWVQNHHLQ KRRHRNRLTV PLGIASATKE ARKRRMARQR RFSSLHHHKT  240
QQINQQQGWK AEKNLRFLLQ KVLKQSDVGN LGRIVLPKRE AEIHLPELDA RDGISIEMED  300
IGTSQVWNMR YRFWPNNKSR MYLLENTGDF VRSNGLQEGD FIVIYSDVKC GKYVRLNFYM  360
HTFYL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24650.1	6e-65	B3 family protein