PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA54326.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

G2-like

Protein Properties

Length: 319aa MW: 34421 Da PI: 8.7423

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA54326.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	100.2	1.4e-31	109	162	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH++Fv+ave LGG+e+AtPk++lelm+vk Ltl+hvkSHLQ+YR+ PKA54326.1 109 PRMRWTTTLHSHFVHAVELLGGHERATPKSVLELMNVKELTLAHVKSHLQMYRT 162 9****************************************************7 PP
2	Myb_DNA-binding	47	5.7e-15	110	161	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWTt ++ +v+av++lGg+ t+k++ + m+ k +tl ++ks++q+y+ PKA54326.1 110 RMRWTTTLHSHFVHAVELLGGHeraTPKSVLELMNvKELTLAHVKSHLQMYR 161 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 319 aa Download sequence
MTSGALSPAR GAVLPDLSLQ ISPPAISGSL DAARDQPPHP VNGPSKRPFT SIGSCDDQSG 60 APTLSLRFEA PPPPPPASGE VSSGGHPQIY SFKRNSRLGH GGKRSLRAPR MRWTTTLHSH 120 FVHAVELLGG HERATPKSVL ELMNVKELTL AHVKSHLQMY RTVKSADRAV GGQGQGQSEM 180 GLSQRAEVEG MLPLDQKAGL NPSYSLSAPT PPTARGPCSP LMDNAWNASL LERGTSHQLL 240 ISDNSLSNRE SQEMLVDEER DLGRCCWKQT AKGKGDLAVI SDSNKTLGKL PDLEMSLGRR 300 SWHMEYSEAS NEMKLLKCL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G42630.1	9e-47	G2-like family protein