PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA54288.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | C2H2 | ||||||||
Protein Properties | Length: 178aa MW: 19270.1 Da PI: 9.0038 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12 | 0.00065 | 78 | 99 | 1 | 22 |
EEETTTTEEESSHHHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt 22 y+C++C k F++ L H++ PKA54288.1 78 YQCSICLKEFPTGQALGGHMSQ 99 9************999999975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 178 aa Download sequence |
MISLLIRVPS PVGSSDESSN LLVEKGSKRK RSEHKCSLCG DAFPSHERYP GGHKMSHRKA 60 LSKSSAGAST ATGSRRIYQC SICLKEFPTG QALGGHMSQS CDFVEASCIA GSSTMPTTSL 120 LSSTEFELNI PPAPETPLES VGRCGLLEKE DRVLKALPYK KRFSIKFCVK ALSCRQND |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G27730.1 | 2e-10 | C2H2 family protein |